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    Date Issued2021 (1)AuthorCarbone, Christine E. (1)Demo, Gabriel (1)
    Gamper, Jr., Howard (1)
    Hou, Ya-Ming (1)Korostelev, Andrei A. (1)View MoreUMass Chan AffiliationDepartment of Biochemistry and Molecular Pharmacology (1)Graduate School of Biomedical Sciences (1)RNA Therapeutics Institute (1)Document TypePreprint (1)Keywordcryo-EM (1)Investigative Techniques (1)Molecular Biology (1)mRNA (1)Nucleic Acids, Nucleotides, and Nucleosides (1)View MoreJournalbioRxiv (1)

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    Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP [preprint]

    Carbone, Christine E.; Loveland, Anna B.; Gamper, Jr., Howard; Hou, Ya-Ming; Demo, Gabriel; Korostelev, Andrei A. (2021-05-31)
    During translation, a conserved GTPase elongation factor—EF-G in bacteria or eEF2 in eukaryotes—translocates tRNA and mRNA through the ribosome. EF-G has been proposed to act as a flexible motor that propels tRNA and mRNA movement, as a rigid pawl that biases unidirectional translocation resulting from ribosome rearrangements, or by various combinations of motor- and pawl-like mechanisms. Using time-resolved cryo-EM, we visualized GTP-catalyzed translocation without inhibitors, capturing elusive structures of ribosome•EF-G intermediates at near-atomic resolution. Prior to translocation, EF-G binds near peptidyl-tRNA, while the rotated 30S subunit stabilizes the EF-G GTPase center. Reverse 30S rotation releases Pi and translocates peptidyl-tRNA and EF-G by ∼20 Å. An additional 4-Å translocation initiates EF-G dissociation from a transient ribosome state with highly swiveled 30S head. The structures visualize how nearly rigid EF-G rectifies inherent and spontaneous ribosomal dynamics into tRNA-mRNA translocation, whereas GTP hydrolysis and Pi release drive EF-G dissociation.
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