The 4D nucleome project
Dekker, Job ; Belmont, Andrew S. ; Guttman, Mitchell ; Leshyk, Victor O. ; Lis, John T. ; Lomvardas, Stavros ; Mirny, Leonid A. ; O'Shea, Clodagh C. ; Park, Peter J. ; Ren, Bing ... show 10 more
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Authors
Belmont, Andrew S.
Guttman, Mitchell
Leshyk, Victor O.
Lis, John T.
Lomvardas, Stavros
Mirny, Leonid A.
O'Shea, Clodagh C.
Park, Peter J.
Ren, Bing
Ritland Politz, Joan C.
Shendure, Jay
Zhong, Sheng
4D Nucleome Network
Parsi, Krishna Mohan
Maehr, Rene
Sontheimer, Erik J.
Grunwald, David
Kaufman, Paul D.
Zhu, Lihua Julie
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Abstract
The 4D Nucleome Network aims to develop and apply approaches to map the structure and dynamics of the human and mouse genomes in space and time with the goal of gaining deeper mechanistic insights into how the nucleus is organized and functions. The project will develop and benchmark experimental and computational approaches for measuring genome conformation and nuclear organization, and investigate how these contribute to gene regulation and other genome functions. Validated experimental technologies will be combined with biophysical approaches to generate quantitative models of spatial genome organization in different biological states, both in cell populations and in single cells.
Source
Dekker J, Belmont AS, Guttman M, Leshyk VO, Lis JT, Lomvardas S, Mirny LA, O'Shea CC, Park PJ, Ren B, Politz JCR, Shendure J, Zhong S; 4D Nucleome Network. The 4D nucleome project. Nature. 2017 Sep 13;549(7671):219-226. doi: 10.1038/nature23884. Erratum in: Nature. 2017 Nov 22;: PMID: 28905911; PMCID: PMC5617335. Link to article on publisher's site
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Notes
Members of the 4D Nucleome Network from UMass Medical School who collaborated on this project include Krishna M. Parsi, Rene Maehr, Erik J. Sontheimer, David Grunwald, Paul D. Kaufman, and Lihua (Julie) Zhu.
This article is based on a previously available preprint on bioRxiv that is also available in eScholarship@UMMS.