Design, creation, and use of the Test Us Bank (TUB) COVID-19 sample biorepository
Broach, John ; Achenbach, Chad ; Behar, Stephanie ; O'Connor, Laurel ; Tarrant, Seanan ; Ferranto, Julia ; Wright, Colton ; Hartin, Paul ; Orwig, Taylor ; Nanavati, Janvi ... show 10 more
Authors
Achenbach, Chad
Behar, Stephanie
O'Connor, Laurel
Tarrant, Seanan
Ferranto, Julia
Wright, Colton
Hartin, Paul
Orwig, Taylor
Nanavati, Janvi
Kalibala, Benedict
Woods, Kelsey
Shaw, Bernadette
Flahive, Julie
Barton, Bruce
Hafer, Nathaniel
Herbert, Carly
Fahey, Nisha
Gibson, Laura
Simin, Karl
Kowalik, Timothy
Ward, Doyle V
Mirza, Agha W
Murphy, Robert L
Caputo, Matthew
Buchholz, Bryan
Fantasia, Heidi
Koren, Ainat
Marchand, Lisa
Oludare, Simisola
Sogade, Felix
Ritland, Dana
Davis, Cedrice
Grenier, Allen
Baron, Christi
Brent, Ellie
McKenney, Jennifer Bacani
Elder, Nancy
Michaels, LeAnn
Ferrara, Laura
Theron, Grant
Palmer, Zaida
Levy, Barcey
Daly, Jeanette
Parang, Kim
Schmidt, Megan
Buxton, Denis
Heetderks, William
Manabe, Yukari C
Soni, Apurv
McManus, David
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Abstract
Shortly after the first case of SARS-CoV-2 was diagnosed a public health emergency (PHE) was declared and a multi-agency response was initiated within the US federal government to create and propagate testing capacity. As part of this response, an unprecedented program designated Rapid Acceleration of Diagnostics (RADx) Tech was established by the National Institutes of Health (NIH) to facilitate the development of point-of-care tests for the COVID-19. The RADx Tech Clinical Studies Core (CSC), located at the University of Massachusetts Chan Medical School (UMass Chan), with partnering academic, private, and non-governmental organizations around the country, was tasked with developing clinical studies to support this work. This manuscript details development of a biorepository specifically focused on the collection and storage of samples designed for diagnostic platform development. It highlights the unified collection and annotation process that enabled gathering a diverse set of samples. This diversity encompasses the geography and backgrounds of the participants as well as sample characteristics such as variant type and RT-PCR cycle threshold (CT) value of the corresponding reference sample on a uniform clinical reference platform.
Source
Broach J, Achenbach C, Behar S, O'Connor L, Tarrant S, Ferranto J, Wright C, Hartin P, Orwig T, Nanavati J, Kalibala B, Woods K, Shaw B, Flahive J, Barton B, Hafer N, Herbert C, Fahey N, Gibson L, Simin K, Kowalik T, Ward DV, Mirza AW, Murphy RL, Caputo M, Buchholz B, Fantasia H, Koren A, Marchand L, Oludare S, Sogade F, Ritland D, Davis C, Grenier A, Baron C, Brent E, McKenney JB, Elder N, Michaels L, Ferrara L, Theron G, Palmer Z, Levy B, Daly J, Parang K, Schmidt M, Buxton D, Heetderks W, Manabe YC, Soni A, McManus D. Design, creation, and use of the Test Us Bank (TUB) COVID-19 sample biorepository. BMC Infect Dis. 2024 Nov 12;24(1):1282. doi: 10.1186/s12879-024-10154-0. PMID: 39528968; PMCID: PMC11556042.