CRISPR-Sirius: RNA scaffolds for signal amplification in genome imaging
Ma, Hanhui ; Tu, Li-Chun ; Naseri, Ardalan ; Chung, Yu-Chieh ; Grunwald, David ; Zhang, Shaojie ; Pederson, Thoru
Ma, Hanhui
Tu, Li-Chun
Naseri, Ardalan
Chung, Yu-Chieh
Grunwald, David
Zhang, Shaojie
Pederson, Thoru
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UMass Chan Affiliations
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Journal Article
Publication Date
2018-11-01
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Abstract
Clustered regularly interspaced short palindromic repeats (CRISPR) guide RNA scaffolds have been adapted to carry multiple binding sites for fluorescent proteins to enhance brightness for live cell imaging of genomic loci. However, many of these modifications result in guide RNA instability and thus produce lower genome-labeling efficiency than anticipated. Here we introduce CRISPR-Sirius, based on octet arrays of aptamers conferring both enhanced guide RNA stability and brightness, and provide initial biological applications of this platform.
Source
Nat Methods. 2018 Nov;15(11):928-931. doi: 10.1038/s41592-018-0174-0. Epub 2018 Oct 30. Link to article on publisher's site
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DOI
10.1038/s41592-018-0174-0
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PubMed ID
30377374