Proximity among distant regulatory elements at the beta-globin locus requires GATA-1 and FOG-1
Vakoc, Christopher R. ; Letting, Danielle L. ; Gheldof, Nele ; Sawado, Tomoyuki ; Bender, M. A. ; Groudine, Mark ; Weiss, Mitchell J. ; Dekker, Job ; Blobel, Gerd A.
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UMass Chan Affiliations
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Keywords
Base Sequence
Binding Sites
Carrier Proteins
Cell Line
DNA
DNA-Binding Proteins
Enhancer Elements, Genetic
Erythroid-Specific DNA-Binding Factors
GATA1 Transcription Factor
*Genes, Regulator
Globins
Humans
Locus Control Region
Mice
Mice, Mutant Strains
Nuclear Proteins
Nucleic Acid Conformation
Promoter Regions, Genetic
Protein Binding
RNA Polymerase II
Transcription Factors
Genetics and Genomics
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Embargo Expiration Date
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Abstract
Recent evidence suggests that long-range enhancers and gene promoters are in close proximity, which might reflect the formation of chromatin loops. Here, we examined the mechanism for DNA looping at the beta-globin locus. By using chromosome conformation capture (3C), we show that the hematopoietic transcription factor GATA-1 and its cofactor FOG-1 are required for the physical interaction between the beta-globin locus control region (LCR) and the beta-major globin promoter. Kinetic studies reveal that GATA-1-induced loop formation correlates with the onset of beta-globin transcription and occurs independently of new protein synthesis. GATA-1 occupies the beta-major globin promoter normally in fetal liver erythroblasts from mice lacking the LCR, suggesting that GATA-1 binding to the promoter and LCR are independent events that occur prior to loop formation. Together, these data demonstrate that GATA-1 and FOG-1 are essential anchors for a tissue-specific chromatin loop, providing general insights into long-range enhancer function.
Source
Mol Cell. 2005 Feb 4;17(3):453-62. Link to article on publisher's site