Novel Observations From Next-Generation RNA Sequencing of Highly Purified Human Adult and Fetal Islet Cell Subsets
dc.contributor.author | Blodgett, David M. | |
dc.contributor.author | Nowosielska, Anetta | |
dc.contributor.author | Afik, Shaked | |
dc.contributor.author | Pechhold, Susanne | |
dc.contributor.author | Cura, Anthony J. | |
dc.contributor.author | Kennedy, Norman J. | |
dc.contributor.author | Kim, Soyoung | |
dc.contributor.author | Kucukural, Alper | |
dc.contributor.author | Davis, Roger J. | |
dc.contributor.author | Kent, Sally C | |
dc.contributor.author | Greiner, Dale L. | |
dc.contributor.author | Garber, Manuel | |
dc.contributor.author | Harlan, David M. | |
dc.contributor.author | diLorio, Philip J. Jr. | |
dc.date | 2022-08-11T08:07:59.000 | |
dc.date.accessioned | 2022-08-23T15:38:26Z | |
dc.date.available | 2022-08-23T15:38:26Z | |
dc.date.issued | 2015-09-01 | |
dc.date.submitted | 2016-01-07 | |
dc.identifier.citation | <p>Diabetes. 2015 Sep;64(9):3172-81. doi: 10.2337/db15-0039. Epub 2015 Apr 30. <a href="http://dx.doi.org/10.2337/db15-0039">Link to article on publisher's site</a></p> | |
dc.identifier.issn | 0012-1797 (Linking) | |
dc.identifier.doi | 10.2337/db15-0039 | |
dc.identifier.pmid | 25931473 | |
dc.identifier.uri | http://hdl.handle.net/20.500.14038/25935 | |
dc.description.abstract | Understanding distinct gene expression patterns of normal adult and developing fetal human pancreatic alpha- and beta-cells is crucial for developing stem cell therapies, islet regeneration strategies, and therapies designed to increase beta-cell function in patients with diabetes (type 1 or 2). Toward that end, we have developed methods to highly purify alpha-, beta-, and delta-cells from human fetal and adult pancreata by intracellular staining for the cell-specific hormone content, sorting the subpopulations by flow cytometry, and, using next-generation RNA sequencing, we report the detailed transcriptomes of fetal and adult alpha- and beta-cells. We observed that human islet composition was not influenced by age, sex, or BMI, and transcripts for inflammatory gene products were noted in fetal beta-cells. In addition, within highly purified adult glucagon-expressing alpha-cells, we observed surprisingly high insulin mRNA expression, but not insulin protein expression. This transcriptome analysis from highly purified islet alpha- and beta-cell subsets from fetal and adult pancreata offers clear implications for strategies that seek to increase insulin expression in type 1 and type 2 diabetes. long as the work is properly cited, the use is educational and not for profit, and the work is not altered. | |
dc.language.iso | en_US | |
dc.relation | <p><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=25931473&dopt=Abstract">Link to Article in PubMed</a></p> | |
dc.relation.url | http://dx.doi.org/10.2337/db15-0039 | |
dc.subject | UMCCTS funding | |
dc.subject | Biochemistry | |
dc.subject | Bioinformatics | |
dc.subject | Cell Biology | |
dc.subject | Computational Biology | |
dc.subject | Endocrinology, Diabetes, and Metabolism | |
dc.subject | Integrative Biology | |
dc.subject | Systems Biology | |
dc.title | Novel Observations From Next-Generation RNA Sequencing of Highly Purified Human Adult and Fetal Islet Cell Subsets | |
dc.type | Journal Article | |
dc.source.journaltitle | Diabetes | |
dc.source.volume | 64 | |
dc.source.issue | 9 | |
dc.identifier.legacycoverpage | https://escholarship.umassmed.edu/bioinformatics_pubs/76 | |
dc.identifier.contextkey | 7992044 | |
html.description.abstract | <p>Understanding distinct gene expression patterns of normal adult and developing fetal human pancreatic alpha- and beta-cells is crucial for developing stem cell therapies, islet regeneration strategies, and therapies designed to increase beta-cell function in patients with diabetes (type 1 or 2). Toward that end, we have developed methods to highly purify alpha-, beta-, and delta-cells from human fetal and adult pancreata by intracellular staining for the cell-specific hormone content, sorting the subpopulations by flow cytometry, and, using next-generation RNA sequencing, we report the detailed transcriptomes of fetal and adult alpha- and beta-cells. We observed that human islet composition was not influenced by age, sex, or BMI, and transcripts for inflammatory gene products were noted in fetal beta-cells. In addition, within highly purified adult glucagon-expressing alpha-cells, we observed surprisingly high insulin mRNA expression, but not insulin protein expression. This transcriptome analysis from highly purified islet alpha- and beta-cell subsets from fetal and adult pancreata offers clear implications for strategies that seek to increase insulin expression in type 1 and type 2 diabetes. long as the work is properly cited, the use is educational and not for profit, and the work is not altered.</p> | |
dc.identifier.submissionpath | bioinformatics_pubs/76 | |
dc.contributor.department | Program in Bioinformatics and Integrative Biology | |
dc.contributor.department | Department of Biochemistry and Molecular Pharmacology | |
dc.contributor.department | Program in Molecular Medicine | |
dc.contributor.department | Diabetes Center of Excellence | |
dc.contributor.department | Department of Medicine | |
dc.source.pages | 3172-81 |