MethodsJ2: A Software Tool to Improve Microscopy Methods Reporting [preprint]

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Authors
Ryan, Joel
Pengo, Thomas
Rigano, Alex
Montero Llopis, Paula
Itano, Michelle S.
Cameron, Lisa
Marqués, Guillermo
Strambio-De-Castillia, Caterina
Sanders, Mark A.
Brown, Claire M.
UMass Chan Affiliations
Program in Molecular Medicine
Document Type
Preprint
Publication Date
2021-06-24
Keywords
Bioinformatics
software
microscopy
images
metadata
methods
reporting
reproducibility
Bioimaging and Biomedical Optics
Bioinformatics

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Abstract
Proper reporting of metadata is essential to reproduce microscopy experiments, interpret results and share images. Experimental scientists can report details about sample preparation and imaging conditions while imaging scientists have the expertise required to collect and report the image acquisition, hardware and software metadata information. MethodsJ2 is an ImageJ/Fiji based software tool that gathers metadata and automatically generates text for the methods section of publications.
Source

bioRxiv 2021.06.23.449674; doi: https://doi.org/10.1101/2021.06.23.449674. Link to preprint on bioRxiv.
DOI
10.1101/2021.06.23.449674
Permanent Link to this Item
http://hdl.handle.net/20.500.14038/29869
Notes

This article is a preprint. Preprints are preliminary reports of work that have not been certified by peer review.
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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Distribution License
http://creativecommons.org/licenses/by-nc-nd/4.0/
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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Except where otherwise noted, this item's license is described as The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.