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REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology

dc.contributor.authorSarkans, Ugis
dc.contributor.authorGrunwald, David
dc.contributor.authorStrambio-De-Castillia, Caterina
dc.contributor.authorKleywegt, Gerard J.
dc.contributor.authorBrazma, Alvis
dc.date2022-08-11T08:10:18.000
dc.date.accessioned2022-08-23T17:03:25Z
dc.date.available2022-08-23T17:03:25Z
dc.date.issued2021-05-21
dc.date.submitted2021-11-01
dc.identifier.citation<p>Sarkans U, Chiu W, Collinson L, Darrow MC, Ellenberg J, Grunwald D, Hériché JK, Iudin A, Martins GG, Meehan T, Narayan K, Patwardhan A, Russell MRG, Saibil HR, Strambio-De-Castillia C, Swedlow JR, Tischer C, Uhlmann V, Verkade P, Barlow M, Bayraktar O, Birney E, Catavitello C, Cawthorne C, Wagner-Conrad S, Duke E, Paul-Gilloteaux P, Gustin E, Harkiolaki M, Kankaanpää P, Lemberger T, McEntyre J, Moore J, Nicholls AW, Onami S, Parkinson H, Parsons M, Romanchikova M, Sofroniew N, Swoger J, Utz N, Voortman LM, Wong F, Zhang P, Kleywegt GJ, Brazma A. REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology. Nat Methods. 2021 May 21. doi: 10.1038/s41592-021-01166-8. Epub ahead of print. PMID: 34021280. <a href="https://doi.org/10.1038/s41592-021-01166-8">Link to article on publisher's site</a></p>
dc.identifier.issn1548-7091 (Linking)
dc.identifier.doi10.1038/s41592-021-01166-8
dc.identifier.pmid34021280
dc.identifier.urihttp://hdl.handle.net/20.500.14038/44420
dc.description<p>Full author list omitted for brevity. For the full list of authors, see article.</p>
dc.description.abstractBioimaging data have significant potential for reuse, but unlocking this potential requires systematic archiving of data and metadata in public databases. We propose draft metadata guidelines to begin addressing the needs of diverse communities within light and electron microscopy. We hope this publication and the proposed Recommended Metadata for Biological Images (REMBI) will stimulate discussions about their implementation and future extension.
dc.language.isoen_US
dc.relation<p><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=34021280&dopt=Abstract">Link to Article in PubMed</a></p>
dc.relation.urlhttps://doi.org/10.1038/s41592-021-01166-8
dc.subjectData integration
dc.subjectMolecular imaging
dc.subjectOptical imaging
dc.subjectBiochemistry, Biophysics, and Structural Biology
dc.subjectBioimaging and Biomedical Optics
dc.subjectLaboratory and Basic Science Research
dc.subjectOptics
dc.titleREMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology
dc.typeJournal Article
dc.source.journaltitleNature methods
dc.identifier.legacycoverpagehttps://escholarship.umassmed.edu/pmm_pp/153
dc.identifier.contextkey25697737
html.description.abstract<p>Bioimaging data have significant potential for reuse, but unlocking this potential requires systematic archiving of data and metadata in public databases. We propose draft metadata guidelines to begin addressing the needs of diverse communities within light and electron microscopy. We hope this publication and the proposed Recommended Metadata for Biological Images (REMBI) will stimulate discussions about their implementation and future extension.</p>
dc.identifier.submissionpathpmm_pp/153
dc.contributor.departmentProgram in Molecular Medicine
dc.contributor.departmentRNA Therapeutics Institute


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