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dc.contributor.authorXi, Jinxiang
dc.contributor.authorWang, Junshi
dc.contributor.authorSi, Xiuhua April
dc.contributor.authorZheng, Shaokuan
dc.contributor.authorDonepudi, Ramesh
dc.contributor.authorDong, Haibo
dc.date2022-08-11T08:10:49.000
dc.date.accessioned2022-08-23T17:21:13Z
dc.date.available2022-08-23T17:21:13Z
dc.date.issued2020-12-01
dc.date.submitted2020-12-14
dc.identifier.citation<p>Xi J, Wang J, Si XA, Zheng S, Donepudi R, Dong H. Extracting signature responses from respiratory flows: Low-dimensional analyses on Direct Numerical Simulation-predicted wakes of a flapping uvula. Int J Numer Method Biomed Eng. 2020 Dec;36(12):e3406. doi: 10.1002/cnm.3406. Epub 2020 Oct 29. PMID: 33070467. <a href="https://doi.org/10.1002/cnm.3406">Link to article on publisher's site</a></p>
dc.identifier.issn2040-7939 (Linking)
dc.identifier.doi10.1002/cnm.3406
dc.identifier.pmid33070467
dc.identifier.urihttp://hdl.handle.net/20.500.14038/48471
dc.description.abstractUvula-induced snoring and associated obstructive sleep apnea is a complex phenomenon characterized by vibrating structures and highly transient vortex dynamics. This study aimed to extract signature features of uvula wake flows of different pathological origins and develop a linear reduced-order surrogate model for flow control. Six airway models were developed with two uvula kinematics and three pharynx constriction levels. A direct numerical simulation (DNS) flow solver based on the immersed boundary method was utilized to resolve the wake flows induced by the flapping uvula. Key spatial and temporal responses of the flow to uvula kinematics and pharynx constriction were investigated using continuous wavelet transform (CWT), proper orthogonal decomposition (POD), and dynamic mode decomposition (DMD). Results showed highly complex patterns in flow topologies. CWT analysis revealed multiscale correlations in both time and space between the flapping uvular and wake flows. POD analysis successfully separated the flows among the six models by projecting the datasets in the vector space spanned by the first three eigenmodes. Perceivable differences were also captured in the time evolution of the DMD modes among the six models. A linear reduced-order surrogate model was constructed from the predominant eigenmodes obtained from the DMD analysis and predicted vortex patterns from this surrogate model agreed well with the corresponding DNS simulations. The computational and analytical platform presented in this study could bring a variety of applications in breathing-related disorders and beyond. The computational efficiency of surrogate modeling makes it well suited for flow control, forecasting, and uncertainty analyses.
dc.language.isoen_US
dc.relation<p><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=33070467&dopt=Abstract">Link to Article in PubMed</a></p>
dc.relation.urlhttps://doi.org/10.1002/cnm.3406
dc.subjectDNS
dc.subjectcontinuous wavelet analysis
dc.subjectdynamic mode decomposition
dc.subjectobstructive sleep apnea
dc.subjectproper orthogonal decomposition
dc.subjectsnoring
dc.subjectuvula vibration
dc.subjectBiomedical Engineering and Bioengineering
dc.subjectNumerical Analysis and Scientific Computing
dc.subjectPathological Conditions, Signs and Symptoms
dc.subjectRadiology
dc.subjectRespiratory Tract Diseases
dc.titleExtracting signature responses from respiratory flows: Low-dimensional analyses on Direct Numerical Simulation-predicted wakes of a flapping uvula
dc.typeJournal Article
dc.source.journaltitleInternational journal for numerical methods in biomedical engineering
dc.source.volume36
dc.source.issue12
dc.identifier.legacycoverpagehttps://escholarship.umassmed.edu/radiology_pubs/575
dc.identifier.contextkey20590164
html.description.abstract<p>Uvula-induced snoring and associated obstructive sleep apnea is a complex phenomenon characterized by vibrating structures and highly transient vortex dynamics. This study aimed to extract signature features of uvula wake flows of different pathological origins and develop a linear reduced-order surrogate model for flow control. Six airway models were developed with two uvula kinematics and three pharynx constriction levels. A direct numerical simulation (DNS) flow solver based on the immersed boundary method was utilized to resolve the wake flows induced by the flapping uvula. Key spatial and temporal responses of the flow to uvula kinematics and pharynx constriction were investigated using continuous wavelet transform (CWT), proper orthogonal decomposition (POD), and dynamic mode decomposition (DMD). Results showed highly complex patterns in flow topologies. CWT analysis revealed multiscale correlations in both time and space between the flapping uvular and wake flows. POD analysis successfully separated the flows among the six models by projecting the datasets in the vector space spanned by the first three eigenmodes. Perceivable differences were also captured in the time evolution of the DMD modes among the six models. A linear reduced-order surrogate model was constructed from the predominant eigenmodes obtained from the DMD analysis and predicted vortex patterns from this surrogate model agreed well with the corresponding DNS simulations. The computational and analytical platform presented in this study could bring a variety of applications in breathing-related disorders and beyond. The computational efficiency of surrogate modeling makes it well suited for flow control, forecasting, and uncertainty analyses.</p>
dc.identifier.submissionpathradiology_pubs/575
dc.contributor.departmentDepartment of Radiology
dc.source.pagese3406


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