Show simple item record

dc.contributor.authorWyatt, Matthew C.
dc.contributor.authorHendrickson, R. Curtis
dc.contributor.authorAmes, Michael
dc.contributor.authorBondy, Jessica
dc.contributor.authorRanauro, Paul
dc.contributor.authorEnglish, Thomas M.
dc.contributor.authorBobitt, Keith
dc.contributor.authorDavidson, Arthur
dc.contributor.authorHouston, Thomas K.
dc.contributor.authorEmbi, Peter J.
dc.contributor.authorBerner, Eta S.
dc.date2022-08-11T08:11:02.000
dc.date.accessioned2022-08-23T17:29:36Z
dc.date.available2022-08-23T17:29:36Z
dc.date.issued2014-12-01
dc.date.submitted2019-04-24
dc.identifier.citation<p>J Biomed Inform. 2014 Dec;52:65-71. doi: 10.1016/j.jbi.2013.11.009. Epub 2013 Dec 4. <a href="https://doi.org/10.1016/j.jbi.2013.11.009">Link to article on publisher's site</a></p>
dc.identifier.issn1532-0464 (Linking)
dc.identifier.doi10.1016/j.jbi.2013.11.009
dc.identifier.pmid24316052
dc.identifier.urihttp://hdl.handle.net/20.500.14038/50357
dc.description.abstractCross-institutional data sharing for cohort discovery is critical to enabling future research. While particularly useful in rare diseases, the ability to target enrollment and to determine if an institution has a sufficient number of patients is valuable in all research, particularly in the initiation of projects and collaborations. An optimal technology solution would work with any source database with minimal resource investment for deployment and would meet all necessary security and confidentiality requirements of participating organizations. We describe a platform-neutral reference implementation to meet these requirements: the Federated Aggregate Cohort Estimator (FACE). FACE was developed and implemented through a collaboration of The University of Alabama at Birmingham (UAB), The Ohio State University (OSU), the University of Massachusetts Medical School (UMMS), and the Denver Health and Hospital Authority (DHHA) a clinical affiliate of the Colorado Clinical and Translational Sciences Institute. The reference implementation of FACE federated diverse SQL data sources and an i2b2 instance to estimate combined research subject availability from three institutions. It used easily-deployed virtual machines and addressed privacy and security concerns for data sharing.
dc.language.isoen_US
dc.relation<p><a href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=pubmed&cmd=Retrieve&list_uids=24316052&dopt=Abstract">Link to Article in PubMed</a></p>
dc.relation.urlhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4045656/
dc.subjectCohort discovery
dc.subjectData sharing
dc.subjectFederated query
dc.subjectGrid architecture
dc.subjectTRIAD
dc.subjecti2b2
dc.subjectUMCCTS funding
dc.subjectBioinformatics
dc.subjectDatabases and Information Systems
dc.subjectHealth and Medical Administration
dc.subjectHealth Information Technology
dc.subjectTranslational Medical Research
dc.titleFederated Aggregate Cohort Estimator (FACE): an easy to deploy, vendor neutral, multi-institutional cohort query architecture
dc.typeJournal Article
dc.source.journaltitleJournal of biomedical informatics
dc.source.volume52
dc.identifier.legacycoverpagehttps://escholarship.umassmed.edu/umccts_pubs/185
dc.identifier.contextkey14344367
html.description.abstract<p>Cross-institutional data sharing for cohort discovery is critical to enabling future research. While particularly useful in rare diseases, the ability to target enrollment and to determine if an institution has a sufficient number of patients is valuable in all research, particularly in the initiation of projects and collaborations. An optimal technology solution would work with any source database with minimal resource investment for deployment and would meet all necessary security and confidentiality requirements of participating organizations. We describe a platform-neutral reference implementation to meet these requirements: the Federated Aggregate Cohort Estimator (FACE). FACE was developed and implemented through a collaboration of The University of Alabama at Birmingham (UAB), The Ohio State University (OSU), the University of Massachusetts Medical School (UMMS), and the Denver Health and Hospital Authority (DHHA) a clinical affiliate of the Colorado Clinical and Translational Sciences Institute. The reference implementation of FACE federated diverse SQL data sources and an i2b2 instance to estimate combined research subject availability from three institutions. It used easily-deployed virtual machines and addressed privacy and security concerns for data sharing.</p>
dc.identifier.submissionpathumccts_pubs/185
dc.contributor.departmentDepartment of Quantitative Health Sciences
dc.contributor.departmentResearch Computing Services
dc.source.pages65-71


Files in this item

Thumbnail
Name:
Publisher version

This item appears in the following Collection(s)

Show simple item record